Sorry for the late reply, never got a notification (or just missed it)
Klipper sends out the warning but does not halt the printer/control. I could still keep using it.
In this case is because I use the "prusa method" to level both sides of the Z axis. Moving all the way to the top.
If I do it twice without homing that happens because max Z height in klipper and repetier differs. (keep forgetting to change it)
That may be a odd example as I agree it should not exactly happen, the reason I used it is because it was the first case I could recall.
I give you another that is more simple.
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10:15:02.320: ok
10:15:07.716: N30 G1 X112.00 F3000
10:15:07.720: Firmware was halted, trying to reconnect. Eventually running print is stopped.
10:15:07.720: Firmware stopped! You can only send host and shell commands until you hit emergency stop or restart the printer.
10:15:07.720: !! Must home axis first: 45.000 0.000 0.045 [0.000]
10:15:07.720: ok
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I did home to X and Y but not Z and when I tried to move the X it gives that error.
Again the klipper firmware is not halted or preventing me from doing more commands but Repetier parser decided that was a error.
I'll try to update the rule to exclude these.
Thanks again for the superb support!