If you changed the Z steps in the config.h and uploaded the firmware, you will still have the old Z steps in eeprom.
Send
M502
M500
this will read settings from config and save to eeprom
or you can just edit the eeprom directly via repetier host, (no need to do the M501,M500) as eeprom is updated real time.
Your new lead screws are most likely the 4 start variety so will have a Z step of 400
On my prussa I3 clone i use Z_steps 400. Z max feed rate 28. Z accelleration 800. Z jerk 0.3