Actually the heater is fixed, but the 2nd extruder motor does not work. Instead of turning continuously it turns back and forth only.
The sad part about it is that this is the second board, and the first board is now doing this on both E_motors. What is going on? is the firmware somehow killing the stepper motor control? Because I put Marlin back on the first board and is doing the same even with Marlin... did Repetier firmware kill the board or the stepper motor control?